Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP9XQ93008 AL391422.3-201ENST00000603791 2761 ntBASIC16.42■□□□□ 0.22
USP9XQ93008 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
USP9XQ93008 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
USP9XQ93008 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.41■□□□□ 0.22
USP9XQ93008 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.41■□□□□ 0.22
USP9XQ93008 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 AC010240.3-201ENST00000607688 395 ntBASIC16.41■□□□□ 0.22
USP9XQ93008 FAM197Y3-203ENST00000618346 717 ntBASIC16.41■□□□□ 0.22
USP9XQ93008 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
USP9XQ93008 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 MCCD1P1-208ENST00000445732 328 ntBASIC16.41■□□□□ 0.22
USP9XQ93008 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 AC116407.3-201ENST00000623905 1129 ntBASIC16.41■□□□□ 0.22
USP9XQ93008 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.41■□□□□ 0.22
USP9XQ93008 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP9XQ93008 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
USP9XQ93008 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 RPS8P6-201ENST00000426177 609 ntBASIC16.4■□□□□ 0.22
USP9XQ93008 AP006288.1-201ENST00000446065 395 ntBASIC16.4■□□□□ 0.22
USP9XQ93008 MINOS1P3-201ENST00000457048 203 ntBASIC16.4■□□□□ 0.22
USP9XQ93008 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.4■□□□□ 0.22
USP9XQ93008 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.4■□□□□ 0.22
USP9XQ93008 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.4■□□□□ 0.22
USP9XQ93008 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.4■□□□□ 0.22
USP9XQ93008 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP9XQ93008 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.4■□□□□ 0.22
USP9XQ93008 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP9XQ93008 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
USP9XQ93008 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.4■□□□□ 0.22
USP9XQ93008 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.4■□□□□ 0.22
USP9XQ93008 AC124864.1-201ENST00000623408 392 ntBASIC16.4■□□□□ 0.22
USP9XQ93008 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP9XQ93008 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.4■□□□□ 0.22
USP9XQ93008 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
USP9XQ93008 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
USP9XQ93008 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.39■□□□□ 0.22
USP9XQ93008 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.39■□□□□ 0.22
USP9XQ93008 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP9XQ93008 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 HLA-V-201ENST00000429037 534 ntBASIC16.39■□□□□ 0.21
USP9XQ93008 METTL21AP1-201ENST00000438852 635 ntBASIC16.39■□□□□ 0.21
USP9XQ93008 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.39■□□□□ 0.21
USP9XQ93008 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
USP9XQ93008 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.39■□□□□ 0.21
USP9XQ93008 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
USP9XQ93008 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.39■□□□□ 0.21
USP9XQ93008 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.39■□□□□ 0.21
USP9XQ93008 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP9XQ93008 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.39■□□□□ 0.21
USP9XQ93008 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
USP9XQ93008 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 AC114341.1-201ENST00000618070 349 ntBASIC16.38■□□□□ 0.21
USP9XQ93008 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.38■□□□□ 0.21
USP9XQ93008 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 TREX1-205ENST00000625293 1783 ntBASIC16.38■□□□□ 0.21
USP9XQ93008 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 GPR32P1-201ENST00000601788 811 ntBASIC16.38■□□□□ 0.21
USP9XQ93008 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.38■□□□□ 0.21
USP9XQ93008 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
USP9XQ93008 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP9XQ93008 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.38■□□□□ 0.21
USP9XQ93008 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms