Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 AC060766.5-201ENST00000590539 871 ntBASIC17.2■□□□□ 0.34
HPS1Q92902 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.2■□□□□ 0.34
HPS1Q92902 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 AC105020.6-201ENST00000621523 1217 ntBASIC17.2■□□□□ 0.34
HPS1Q92902 MIR2861-201ENST00000636310 90 ntBASIC17.2■□□□□ 0.34
HPS1Q92902 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 KRT17P1-201ENST00000399211 1546 ntBASIC17.2■□□□□ 0.34
HPS1Q92902 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.19■□□□□ 0.34
HPS1Q92902 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HPS1Q92902 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HPS1Q92902 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.19■□□□□ 0.34
HPS1Q92902 AL355472.2-201ENST00000422958 438 ntBASIC17.19■□□□□ 0.34
HPS1Q92902 AC128676.1-201ENST00000454392 318 ntBASIC17.19■□□□□ 0.34
HPS1Q92902 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HPS1Q92902 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.19■□□□□ 0.34
HPS1Q92902 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HPS1Q92902 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
HPS1Q92902 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.19■□□□□ 0.34
HPS1Q92902 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HPS1Q92902 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.19■□□□□ 0.34
HPS1Q92902 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPS1Q92902 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 WIZP1-201ENST00000531444 2299 ntBASIC17.18■□□□□ 0.34
HPS1Q92902 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 AL691432.2-201ENST00000607222 2038 ntBASIC17.18■□□□□ 0.34
HPS1Q92902 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 AC098590.1-201ENST00000468126 897 ntBASIC17.18■□□□□ 0.34
HPS1Q92902 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
HPS1Q92902 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.18■□□□□ 0.34
HPS1Q92902 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS1Q92902 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HPS1Q92902 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS1Q92902 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HPS1Q92902 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms