Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC1BQ8WUY9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC1BQ8WUY9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 AC140113.3-201ENST00000605663 199 ntBASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.93■□□□□ 0.78
DEPDC1BQ8WUY9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 LINC01465-201ENST00000408887 1940 ntBASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AL020996.1-203ENST00000536896 2307 ntBASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
DEPDC1BQ8WUY9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEPDC1BQ8WUY9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DEPDC1BQ8WUY9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms