Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FITM1-202ENST00000559294 800 ntBASIC20.23■□□□□ 0.83
LMO3Q8TAP4 MIR4497-201ENST00000583208 89 ntBASIC20.23■□□□□ 0.83
LMO3Q8TAP4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 AL023803.3-201ENST00000615559 522 ntBASIC20.23■□□□□ 0.83
LMO3Q8TAP4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 GPAT2P1-201ENST00000444924 1672 ntBASIC20.22■□□□□ 0.83
LMO3Q8TAP4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 AC008556.1-201ENST00000610908 2040 ntBASIC20.22■□□□□ 0.83
LMO3Q8TAP4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 AL023284.2-201ENST00000405850 579 ntBASIC20.22■□□□□ 0.83
LMO3Q8TAP4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.22■□□□□ 0.83
LMO3Q8TAP4 AP000525.1-201ENST00000608286 694 ntBASIC20.22■□□□□ 0.83
LMO3Q8TAP4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LMO3Q8TAP4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 AL390955.1-201ENST00000428694 934 ntBASIC20.21■□□□□ 0.83
LMO3Q8TAP4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 MIR4674-201ENST00000582457 87 ntBASIC20.21■□□□□ 0.83
LMO3Q8TAP4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.21■□□□□ 0.83
LMO3Q8TAP4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.2■□□□□ 0.83
LMO3Q8TAP4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AC126763.1-201ENST00000552015 2118 ntBASIC20.2■□□□□ 0.82
LMO3Q8TAP4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LMO3Q8TAP4 AC090164.3-201ENST00000610780 2143 ntBASIC20.2■□□□□ 0.82
LMO3Q8TAP4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms