Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 GPX1P1-201ENST00000388829 606 ntBASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RFWD2Q8NHY2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFWD2Q8NHY2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 CDCA4P2-201ENST00000441182 718 ntBASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 AL162741.1-201ENST00000565563 1558 ntBASIC18.64■□□□□ 0.57
RFWD2Q8NHY2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 KRT8P8-201ENST00000434750 1448 ntBASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 BCL2-203ENST00000589955 5011 ntBASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD2Q8NHY2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 MIR663A-201ENST00000385250 93 ntBASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 AC026185.1-201ENST00000445748 174 ntBASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 LINC00896-202ENST00000609602 2128 ntBASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFWD2Q8NHY2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms