Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK4Q8NE63 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.32■□□□□ 0.52
HIPK4Q8NE63 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK4Q8NE63 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 AC005181.1-201ENST00000604782 1256 ntBASIC18.31■□□□□ 0.52
HIPK4Q8NE63 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HIPK4Q8NE63 AC099398.1-201ENST00000567919 2776 ntBASIC18.3■□□□□ 0.52
HIPK4Q8NE63 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 LSM12P1-201ENST00000411836 588 ntBASIC18.3■□□□□ 0.52
HIPK4Q8NE63 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 MIR5787-201ENST00000611784 55 ntBASIC18.3■□□□□ 0.52
HIPK4Q8NE63 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK4Q8NE63 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 ZNF815P-204ENST00000434898 1737 ntBASIC18.29■□□□□ 0.52
HIPK4Q8NE63 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 AC018553.1-201ENST00000616682 1458 ntBASIC18.29■□□□□ 0.52
HIPK4Q8NE63 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 AL162430.1-201ENST00000480705 870 ntBASIC18.29■□□□□ 0.52
HIPK4Q8NE63 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK4Q8NE63 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms