Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 AC106820.2-201ENST00000563775 3264 ntBASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIML2Q8N7C3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIML2Q8N7C3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIML2Q8N7C3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 AC104417.2-201ENST00000562989 1793 ntBASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 AC120498.8-201ENST00000614275 531 ntBASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 AL121829.2-201ENST00000620908 328 ntBASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIML2Q8N7C3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms