Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
DEPDC4Q8N2C3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 SOX15-203ENST00000570788 1093 ntBASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DEPDC4Q8N2C3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DEPDC4Q8N2C3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 AC142381.4-202ENST00000563973 229 ntBASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 AC012313.1-201ENST00000593393 3059 ntBASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DEPDC4Q8N2C3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms