Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01561Q8N1V8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 AC083906.2-201ENST00000511578 360 ntBASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 C1QL1P1-201ENST00000568105 661 ntBASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 AC004264.1-201ENST00000608354 794 ntBASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01561Q8N1V8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 AC068587.9-201ENST00000641814 219 ntBASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms