Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 KRT18P29-201ENST00000397031 1267 ntBASIC23.37■■□□□ 1.33
SMC5Q8IY18 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 FAM197Y1-201ENST00000421178 764 ntBASIC23.37■■□□□ 1.33
SMC5Q8IY18 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.36■■□□□ 1.33
SMC5Q8IY18 FAM197Y4-202ENST00000622692 608 ntBASIC23.36■■□□□ 1.33
SMC5Q8IY18 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMC5Q8IY18 FSCN1P1-201ENST00000568912 1481 ntBASIC23.36■■□□□ 1.33
SMC5Q8IY18 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 AC116562.2-201ENST00000507042 360 ntBASIC23.35■■□□□ 1.33
SMC5Q8IY18 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 CD177P1-201ENST00000606252 935 ntBASIC23.35■■□□□ 1.33
SMC5Q8IY18 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 AC096733.2-201ENST00000609937 1394 ntBASIC23.35■■□□□ 1.33
SMC5Q8IY18 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SMC5Q8IY18 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMC5Q8IY18 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 GCSHP5-201ENST00000443090 522 ntBASIC23.34■■□□□ 1.33
SMC5Q8IY18 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 AC008622.2-201ENST00000617006 1229 ntBASIC23.34■■□□□ 1.33
SMC5Q8IY18 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.34■■□□□ 1.33
SMC5Q8IY18 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMC5Q8IY18 KRT8P45-201ENST00000414328 1447 ntBASIC23.33■■□□□ 1.33
SMC5Q8IY18 AL135905.2-201ENST00000584934 1404 ntBASIC23.33■■□□□ 1.33
SMC5Q8IY18 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMC5Q8IY18 RCC2P3-201ENST00000418112 1537 ntBASIC23.33■■□□□ 1.33
SMC5Q8IY18 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMC5Q8IY18 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMC5Q8IY18 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SMC5Q8IY18 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
SMC5Q8IY18 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC23.33■■□□□ 1.32
SMC5Q8IY18 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMC5Q8IY18 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.33■■□□□ 1.32
SMC5Q8IY18 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.33■■□□□ 1.32
SMC5Q8IY18 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMC5Q8IY18 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.33■■□□□ 1.32
SMC5Q8IY18 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SMC5Q8IY18 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms