Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 AC092597.1-201ENST00000487352 616 ntBASIC21.03■□□□□ 0.96
TRIM50Q86XT4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 ZNF444P1-201ENST00000559497 298 ntBASIC21.03■□□□□ 0.96
TRIM50Q86XT4 MIR3180-5-201ENST00000583743 153 ntBASIC21.03■□□□□ 0.96
TRIM50Q86XT4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 AC073130.3-201ENST00000624389 2278 ntBASIC21.03■□□□□ 0.96
TRIM50Q86XT4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.02■□□□□ 0.96
TRIM50Q86XT4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM50Q86XT4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TRIM50Q86XT4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM50Q86XT4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM50Q86XT4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 RASA4DP-201ENST00000460726 1199 ntBASIC21.01■□□□□ 0.95
TRIM50Q86XT4 AL136038.3-201ENST00000561909 1096 ntBASIC21.01■□□□□ 0.95
TRIM50Q86XT4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 IRX1P1-201ENST00000438849 1838 ntBASIC21.01■□□□□ 0.95
TRIM50Q86XT4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM50Q86XT4 AC007952.6-201ENST00000573168 2673 ntBASIC21.01■□□□□ 0.95
TRIM50Q86XT4 AC003957.1-201ENST00000625108 2673 ntBASIC21.01■□□□□ 0.95
TRIM50Q86XT4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM50Q86XT4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM50Q86XT4 RCC2P3-201ENST00000418112 1537 ntBASIC21■□□□□ 0.95
TRIM50Q86XT4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21■□□□□ 0.95
TRIM50Q86XT4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21■□□□□ 0.95
TRIM50Q86XT4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21■□□□□ 0.95
TRIM50Q86XT4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21■□□□□ 0.95
TRIM50Q86XT4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21■□□□□ 0.95
TRIM50Q86XT4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
TRIM50Q86XT4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
TRIM50Q86XT4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21■□□□□ 0.95
TRIM50Q86XT4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms