Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 BNIP3L-207ENST00000523949 875 ntTSL 39.71□□□□□ -0.862e-12■■□□□ 12.1
SND1Q7KZF4 TMED7-203ENST00000508420 572 ntTSL 423.45■■□□□ 1.344e-10■■□□□ 12.1
SND1Q7KZF4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.64■■□□□ 1.217e-7■■□□□ 12
SND1Q7KZF4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.8■□□□□ 0.447e-7■■□□□ 12
SND1Q7KZF4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.417e-7■■□□□ 12
SND1Q7KZF4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.227e-7■■□□□ 12
SND1Q7KZF4 G3BP1-204ENST00000517947 558 ntTSL 411.97□□□□□ -0.491e-10■■□□□ 12
SND1Q7KZF4 G3BP1-210ENST00000522367 580 ntTSL 311.97□□□□□ -0.491e-10■■□□□ 12
SND1Q7KZF4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.97■□□□□ 0.631e-10■■□□□ 12
SND1Q7KZF4 SPCS3-204ENST00000513139 589 ntTSL 214.45□□□□□ -0.13e-14■■□□□ 12
SND1Q7KZF4 F10-206ENST00000483537 564 ntTSL 29.6□□□□□ -0.872e-11■■□□□ 12
SND1Q7KZF4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.97■■□□□ 1.592e-8■■□□□ 12
SND1Q7KZF4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.472e-8■■□□□ 12
SND1Q7KZF4 DGAT1-203ENST00000524965 1336 ntTSL 513.65□□□□□ -0.222e-8■■□□□ 12
SND1Q7KZF4 DGAT1-202ENST00000524844 401 ntTSL 38.03□□□□□ -1.122e-8■■□□□ 12
SND1Q7KZF4 EMC3-203ENST00000470827 570 ntTSL 418.73■□□□□ 0.592e-15■■□□□ 12
SND1Q7KZF4 M6PR-213ENST00000544245 660 ntTSL 217.55■□□□□ 0.43e-7■■□□□ 12
SND1Q7KZF4 TAPBP-237ENST00000467025 751 ntTSL 313.01□□□□□ -0.335e-9■■□□□ 12
SND1Q7KZF4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.366e-9■■□□□ 12
SND1Q7KZF4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.33■□□□□ 0.046e-9■■□□□ 12
SND1Q7KZF4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.4□□□□□ -0.266e-9■■□□□ 12
SND1Q7KZF4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.01□□□□□ -1.296e-9■■□□□ 12
SND1Q7KZF4 ATP6V1E1-204ENST00000413576 800 ntTSL 35.01□□□□□ -1.616e-9■■□□□ 12
SND1Q7KZF4 VDAC3-207ENST00000521348 784 ntTSL 513.39□□□□□ -0.278e-7■■□□□ 12
SND1Q7KZF4 VDAC3-205ENST00000520115 580 ntTSL 413.32□□□□□ -0.288e-7■■□□□ 12
SND1Q7KZF4 VDAC3-209ENST00000522069 625 ntTSL 510.8□□□□□ -0.688e-7■■□□□ 12
SND1Q7KZF4 SPTAN1-226ENST00000631315 581 ntTSL 213.66□□□□□ -0.224e-6■■□□□ 12
SND1Q7KZF4 OAT-206ENST00000490096 579 ntTSL 59.39□□□□□ -0.912e-8■■□□□ 12
SND1Q7KZF4 OAT-207ENST00000492376 620 ntTSL 37.26□□□□□ -1.252e-8■■□□□ 12
SND1Q7KZF4 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.347e-8■■□□□ 12
SND1Q7KZF4 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.547e-8■■□□□ 12
SND1Q7KZF4 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.697e-8■■□□□ 12
SND1Q7KZF4 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.857e-8■■□□□ 12
SND1Q7KZF4 FDFT1-206ENST00000525571 810 ntTSL 319.15■□□□□ 0.663e-21■■□□□ 12
SND1Q7KZF4 SLC5A6-218ENST00000492069 705 ntTSL 313.62□□□□□ -0.231e-6■■□□□ 12
SND1Q7KZF4 FDFT1-211ENST00000527045 642 ntTSL 1 (best)8.99□□□□□ -0.973e-21■■□□□ 12
SND1Q7KZF4 HM13-225ENST00000619859 455 ntTSL 36.96□□□□□ -1.33e-15■■□□□ 12
SND1Q7KZF4 ANXA1-204ENST00000456643 799 ntTSL 57.22□□□□□ -1.253e-7■■□□□ 12
SND1Q7KZF4 SGSH-207ENST00000571675 571 ntTSL 215.61■□□□□ 0.094e-8■■□□□ 12
SND1Q7KZF4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.195e-10■■□□□ 12
SND1Q7KZF4 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.73□□□□□ -0.055e-10■■□□□ 12
SND1Q7KZF4 UBB-208ENST00000578706 500 ntTSL 36.43□□□□□ -1.384e-22■■□□□ 12
SND1Q7KZF4 CTNNB1-214ENST00000485265 835 ntTSL 29.8□□□□□ -0.842e-6■■□□□ 12
SND1Q7KZF4 CTNNB1-213ENST00000482042 1366 ntTSL 27.84□□□□□ -1.152e-6■■□□□ 12
SND1Q7KZF4 GRINA-205ENST00000529301 1075 ntTSL 321.38■■□□□ 1.013e-17■■□□□ 12
SND1Q7KZF4 GRINA-203ENST00000525513 796 ntTSL 516.5■□□□□ 0.233e-17■■□□□ 12
SND1Q7KZF4 AGRN-204ENST00000466223 459 ntTSL 216.6■□□□□ 0.255e-17■■□□□ 11.9
SND1Q7KZF4 AGRN-207ENST00000478677 276 ntTSL 212.47□□□□□ -0.415e-17■■□□□ 11.9
SND1Q7KZF4 ANXA1-208ENST00000495713 905 ntTSL 27.07□□□□□ -1.282e-7■■□□□ 11.9
SND1Q7KZF4 IGSF8-203ENST00000448417 1059 ntAPPRIS ALT2 TSL 221.87■■□□□ 1.094e-11■■□□□ 11.9
SND1Q7KZF4 RHBDD3-202ENST00000406335 755 ntTSL 221.82■■□□□ 1.084e-7■■□□□ 11.9
SND1Q7KZF4 IGSF8-204ENST00000460351 876 ntTSL 215.46■□□□□ 0.074e-11■■□□□ 11.9
SND1Q7KZF4 SSR2-204ENST00000467041 577 ntTSL 323.31■■□□□ 1.321e-17■■□□□ 11.9
SND1Q7KZF4 ATP13A1-214ENST00000497556 2442 ntTSL 215.52■□□□□ 0.079e-7■■□□□ 11.9
SND1Q7KZF4 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC10.7□□□□□ -0.72e-19■■□□□ 11.9
SND1Q7KZF4 OAT-205ENST00000483711 570 ntTSL 57.7□□□□□ -1.184e-11■■□□□ 11.9
SND1Q7KZF4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.71■■■□□ 2.197e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-210ENST00000591286 2111 ntTSL 1 (best)27.86■■■□□ 2.057e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.97e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.39■■□□□ 1.827e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-204ENST00000587597 2212 ntTSL 526.18■■□□□ 1.787e-8■■□□□ 11.9
SND1Q7KZF4 LEPROT-202ENST00000475108 492 ntTSL 322.33■■□□□ 1.177e-9■■□□□ 11.9
SND1Q7KZF4 GART-208ENST00000430874 1036 ntTSL 521.68■■□□□ 1.064e-9■■□□□ 11.9
SND1Q7KZF4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.997e-8■■□□□ 11.9
SND1Q7KZF4 C1QBP-204ENST00000573406 767 ntTSL 220.09■□□□□ 0.811e-7■■□□□ 11.9
SND1Q7KZF4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.347e-8■■□□□ 11.9
SND1Q7KZF4 FAM234A-213ENST00000449945 887 ntTSL 516.35■□□□□ 0.211e-6■■□□□ 11.9
SND1Q7KZF4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.13■□□□□ 0.177e-8■■□□□ 11.9
SND1Q7KZF4 ETFB-203ENST00000593992 603 ntTSL 216.11■□□□□ 0.177e-8■■□□□ 11.9
SND1Q7KZF4 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 07e-8■■□□□ 11.9
SND1Q7KZF4 FAM234A-214ENST00000453430 984 ntTSL 514.42□□□□□ -0.11e-6■■□□□ 11.9
SND1Q7KZF4 FAM234A-206ENST00000420046 1006 ntTSL 514.41□□□□□ -0.11e-6■■□□□ 11.9
SND1Q7KZF4 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.137e-9■■□□□ 11.9
SND1Q7KZF4 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC13.21□□□□□ -0.297e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC13.18□□□□□ -0.37e-8■■□□□ 11.9
SND1Q7KZF4 SLC38A10-209ENST00000546352 580 ntTSL 513.12□□□□□ -0.317e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-211ENST00000591789 682 ntTSL 313.1□□□□□ -0.317e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.337e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-203ENST00000392962 1497 ntTSL 212.91□□□□□ -0.347e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.387e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-207ENST00000595208 1511 ntTSL 212.42□□□□□ -0.427e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-203ENST00000430715 1127 ntTSL 1 (best) BASIC12.14□□□□□ -0.477e-8■■□□□ 11.9
SND1Q7KZF4 PIGS-207ENST00000492429 2658 ntTSL 212.11□□□□□ -0.477e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.497e-8■■□□□ 11.9
SND1Q7KZF4 PIGS-206ENST00000487231 3088 ntTSL 1 (best)11.85□□□□□ -0.517e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-202ENST00000360222 3330 ntTSL 211.37□□□□□ -0.597e-8■■□□□ 11.9
SND1Q7KZF4 LEPROT-204ENST00000488747 345 ntTSL 511.12□□□□□ -0.637e-9■■□□□ 11.9
SND1Q7KZF4 RTN2-205ENST00000588036 546 ntTSL 411.02□□□□□ -0.657e-8■■□□□ 11.9
SND1Q7KZF4 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.717e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-213ENST00000593129 526 ntTSL 210.3□□□□□ -0.767e-8■■□□□ 11.9
SND1Q7KZF4 RTN2-209ENST00000590746 228 ntTSL 39.92□□□□□ -0.827e-8■■□□□ 11.9
SND1Q7KZF4 GART-214ENST00000476524 806 ntTSL 29.24□□□□□ -0.934e-9■■□□□ 11.9
SND1Q7KZF4 RTN2-214ENST00000593187 299 ntTSL 29.18□□□□□ -0.947e-8■■□□□ 11.9
SND1Q7KZF4 GART-202ENST00000366093 805 ntTSL 38.59□□□□□ -1.034e-9■■□□□ 11.9
SND1Q7KZF4 GART-207ENST00000426819 837 ntTSL 58.07□□□□□ -1.124e-9■■□□□ 11.9
SND1Q7KZF4 GART-218ENST00000497313 457 ntTSL 38.02□□□□□ -1.134e-9■■□□□ 11.9
SND1Q7KZF4 GART-217ENST00000488791 778 ntTSL 37.07□□□□□ -1.284e-9■■□□□ 11.9
SND1Q7KZF4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.47□□□□□ -1.377e-9■■□□□ 11.9
SND1Q7KZF4 LHFPL2-202ENST00000502722 570 ntTSL 44.9□□□□□ -1.637e-8■■□□□ 11.9
SND1Q7KZF4 REEP4-203ENST00000518664 996 ntTSL 219.56■□□□□ 0.728e-10■■□□□ 11.9
Retrieved 100 of 13,567 protein–RNA pairs in 99.8 ms