Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 AL137013.1-201ENST00000432946 1228 ntBASIC18.89■□□□□ 0.61
USP45Q70EL2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.89■□□□□ 0.61
USP45Q70EL2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
USP45Q70EL2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.89■□□□□ 0.61
USP45Q70EL2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP45Q70EL2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
USP45Q70EL2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP45Q70EL2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.89■□□□□ 0.61
USP45Q70EL2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.89■□□□□ 0.61
USP45Q70EL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP45Q70EL2 RCC2P3-201ENST00000418112 1537 ntBASIC18.89■□□□□ 0.61
USP45Q70EL2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP45Q70EL2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.89■□□□□ 0.61
USP45Q70EL2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP45Q70EL2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.89■□□□□ 0.61
USP45Q70EL2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.88■□□□□ 0.61
USP45Q70EL2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 MIR4674-201ENST00000582457 87 ntBASIC18.88■□□□□ 0.61
USP45Q70EL2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 KRT8P32-201ENST00000512863 1461 ntBASIC18.88■□□□□ 0.61
USP45Q70EL2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
USP45Q70EL2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP45Q70EL2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.87■□□□□ 0.61
USP45Q70EL2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP45Q70EL2 TERF1P1-201ENST00000311003 1181 ntBASIC18.87■□□□□ 0.61
USP45Q70EL2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP45Q70EL2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.87■□□□□ 0.61
USP45Q70EL2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.87■□□□□ 0.61
USP45Q70EL2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
USP45Q70EL2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
USP45Q70EL2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.87■□□□□ 0.61
USP45Q70EL2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.87■□□□□ 0.61
USP45Q70EL2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP45Q70EL2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.87■□□□□ 0.61
USP45Q70EL2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP45Q70EL2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP45Q70EL2 AL109659.2-201ENST00000606809 1674 ntBASIC18.86■□□□□ 0.61
USP45Q70EL2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.86■□□□□ 0.61
USP45Q70EL2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
USP45Q70EL2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
USP45Q70EL2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 AC005521.1-201ENST00000393351 872 ntBASIC18.86■□□□□ 0.61
USP45Q70EL2 AC010203.1-204ENST00000548782 407 ntBASIC18.86■□□□□ 0.61
USP45Q70EL2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.86■□□□□ 0.61
USP45Q70EL2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.86■□□□□ 0.61
USP45Q70EL2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP45Q70EL2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms