Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 KRT8P32-201ENST00000512863 1461 ntBASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 AL109659.2-201ENST00000606809 1674 ntBASIC21■□□□□ 0.95
SWSAP1Q6NVH7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21■□□□□ 0.95
SWSAP1Q6NVH7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SWSAP1Q6NVH7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 AC024243.1-201ENST00000609234 778 ntBASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SWSAP1Q6NVH7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SWSAP1Q6NVH7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 AL161938.1-201ENST00000569833 2180 ntBASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SWSAP1Q6NVH7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 AL049812.1-201ENST00000432563 2267 ntBASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms