Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 TCF3P1-201ENST00000423021 1937 ntBASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 AC106795.1-205ENST00000512851 1056 ntBASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 SLC25A6P4-201ENST00000586535 553 ntBASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LYSMD4Q5XG99 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 AC099336.1-202ENST00000602961 463 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 AL121912.1-201ENST00000603683 238 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 AL353801.3-201ENST00000609898 542 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 AC006538.3-201ENST00000612495 578 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 AC004263.2-201ENST00000617183 678 ntBASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD4Q5XG99 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 AC233702.3-201ENST00000578656 1387 ntBASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 AL512353.2-201ENST00000448759 1962 ntBASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD4Q5XG99 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD4Q5XG99 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms