Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF220Q5VTB9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF220Q5VTB9 SIRPAP1-201ENST00000448467 1770 ntBASIC18.14■□□□□ 0.5
RNF220Q5VTB9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.14■□□□□ 0.5
RNF220Q5VTB9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
RNF220Q5VTB9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF220Q5VTB9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 AC091874.3-201ENST00000512672 1195 ntBASIC18.14■□□□□ 0.49
RNF220Q5VTB9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 AC018553.1-201ENST00000616682 1458 ntBASIC18.14■□□□□ 0.49
RNF220Q5VTB9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF220Q5VTB9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ESPNP-201ENST00000270691 2015 ntBASIC18.13■□□□□ 0.49
RNF220Q5VTB9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 LINC00896-202ENST00000609602 2128 ntBASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF220Q5VTB9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 ABALON-201ENST00000629058 1903 ntBASIC18.12■□□□□ 0.49
RNF220Q5VTB9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms