Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 AC010240.3-201ENST00000607688 395 ntBASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 AC112497.1-201ENST00000624824 639 ntBASIC20.16■□□□□ 0.82
FNDC1Q4ZHG4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 KRT18P23-201ENST00000435622 1283 ntBASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 GPR32P1-201ENST00000601788 811 ntBASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FNDC1Q4ZHG4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
FNDC1Q4ZHG4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
FNDC1Q4ZHG4 RCC2P3-201ENST00000418112 1537 ntBASIC20.14■□□□□ 0.82
FNDC1Q4ZHG4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AC004870.1-201ENST00000315132 882 ntBASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AL031008.1-201ENST00000619963 541 ntBASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
FNDC1Q4ZHG4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TREX1-205ENST00000625293 1783 ntBASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 KRT17P6-201ENST00000453795 1220 ntBASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 AC074051.2-201ENST00000565115 352 ntBASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC1Q4ZHG4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC1Q4ZHG4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms