Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.52■□□□□ 0.39
CD47Q08722 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CD47Q08722 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CD47Q08722 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD47Q08722 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.39
CD47Q08722 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.51■□□□□ 0.39
CD47Q08722 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.51■□□□□ 0.39
CD47Q08722 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.51■□□□□ 0.39
CD47Q08722 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.51■□□□□ 0.39
CD47Q08722 AC133041.1-202ENST00000642053 222 ntBASIC17.51■□□□□ 0.39
CD47Q08722 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.51■□□□□ 0.39
CD47Q08722 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD47Q08722 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CD47Q08722 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.51■□□□□ 0.39
CD47Q08722 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD47Q08722 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.5■□□□□ 0.39
CD47Q08722 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.5■□□□□ 0.39
CD47Q08722 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD47Q08722 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
CD47Q08722 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.5■□□□□ 0.39
CD47Q08722 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 AL355802.2-201ENST00000402069 882 ntBASIC17.5■□□□□ 0.39
CD47Q08722 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CD47Q08722 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.5■□□□□ 0.39
CD47Q08722 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 AC069152.1-201ENST00000438030 544 ntBASIC17.5■□□□□ 0.39
CD47Q08722 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.5■□□□□ 0.39
CD47Q08722 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.5■□□□□ 0.39
CD47Q08722 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.5■□□□□ 0.39
CD47Q08722 AC060766.5-201ENST00000590539 871 ntBASIC17.5■□□□□ 0.39
CD47Q08722 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.5■□□□□ 0.39
CD47Q08722 AC083880.1-201ENST00000608266 535 ntBASIC17.5■□□□□ 0.39
CD47Q08722 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.5■□□□□ 0.39
CD47Q08722 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
CD47Q08722 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD47Q08722 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CD47Q08722 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD47Q08722 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.49■□□□□ 0.39
CD47Q08722 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.49■□□□□ 0.39
CD47Q08722 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 AC090340.1-201ENST00000620778 4980 ntBASIC17.49■□□□□ 0.39
CD47Q08722 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 AC104417.2-201ENST00000562989 1793 ntBASIC17.49■□□□□ 0.39
CD47Q08722 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CD47Q08722 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD47Q08722 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.49■□□□□ 0.39
CD47Q08722 PNMA6B-201ENST00000538162 1200 ntBASIC17.49■□□□□ 0.39
CD47Q08722 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms