Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.06■□□□□ 0.8
DSC1Q08554 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
DSC1Q08554 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.06■□□□□ 0.8
DSC1Q08554 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.06■□□□□ 0.8
DSC1Q08554 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.06■□□□□ 0.8
DSC1Q08554 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.06■□□□□ 0.8
DSC1Q08554 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
DSC1Q08554 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.06■□□□□ 0.8
DSC1Q08554 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.06■□□□□ 0.8
DSC1Q08554 AC010240.3-201ENST00000607688 395 ntBASIC20.06■□□□□ 0.8
DSC1Q08554 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DSC1Q08554 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DSC1Q08554 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DSC1Q08554 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DSC1Q08554 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DSC1Q08554 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DSC1Q08554 AC016734.2-201ENST00000624325 1377 ntBASIC20.06■□□□□ 0.8
DSC1Q08554 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DSC1Q08554 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.05■□□□□ 0.8
DSC1Q08554 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
DSC1Q08554 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.05■□□□□ 0.8
DSC1Q08554 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 AC068587.9-201ENST00000641814 219 ntBASIC20.05■□□□□ 0.8
DSC1Q08554 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.05■□□□□ 0.8
DSC1Q08554 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DSC1Q08554 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
DSC1Q08554 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.04■□□□□ 0.8
DSC1Q08554 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.04■□□□□ 0.8
DSC1Q08554 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DSC1Q08554 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DSC1Q08554 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.04■□□□□ 0.8
DSC1Q08554 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.04■□□□□ 0.8
DSC1Q08554 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.04■□□□□ 0.8
DSC1Q08554 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.04■□□□□ 0.8
DSC1Q08554 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DSC1Q08554 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.03■□□□□ 0.8
DSC1Q08554 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.03■□□□□ 0.8
DSC1Q08554 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 AC034236.2-201ENST00000606662 1610 ntBASIC20.03■□□□□ 0.8
DSC1Q08554 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DSC1Q08554 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.03■□□□□ 0.8
DSC1Q08554 TSSC2-201ENST00000450217 709 ntBASIC20.03■□□□□ 0.8
DSC1Q08554 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.03■□□□□ 0.8
DSC1Q08554 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
DSC1Q08554 AL121672.3-201ENST00000608644 468 ntBASIC20.03■□□□□ 0.8
DSC1Q08554 AC092119.3-201ENST00000612618 583 ntBASIC20.03■□□□□ 0.8
DSC1Q08554 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.03■□□□□ 0.8
DSC1Q08554 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.03■□□□□ 0.8
DSC1Q08554 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.03■□□□□ 0.8
DSC1Q08554 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DSC1Q08554 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DSC1Q08554 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
DSC1Q08554 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.02■□□□□ 0.8
DSC1Q08554 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.02■□□□□ 0.8
DSC1Q08554 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DSC1Q08554 AL450487.1-201ENST00000426799 995 ntBASIC20.02■□□□□ 0.8
DSC1Q08554 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.02■□□□□ 0.8
DSC1Q08554 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.02■□□□□ 0.8
DSC1Q08554 MIR3180-1-201ENST00000580374 94 ntBASIC20.02■□□□□ 0.8
DSC1Q08554 MIR3180-3-201ENST00000584616 94 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms