Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCS1Q01581 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCS1Q01581 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS1Q01581 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS1Q01581 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCS1Q01581 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS1Q01581 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS1Q01581 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS1Q01581 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 RPS2P4-201ENST00000476944 856 ntBASIC18.18■□□□□ 0.5
HMGCS1Q01581 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 AC131212.4-201ENST00000623606 975 ntBASIC18.18■□□□□ 0.5
HMGCS1Q01581 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCS1Q01581 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCS1Q01581 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 AP002982.1-201ENST00000492365 877 ntBASIC18.17■□□□□ 0.5
HMGCS1Q01581 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCS1Q01581 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCS1Q01581 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.16■□□□□ 0.5
HMGCS1Q01581 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCS1Q01581 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCS1Q01581 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCS1Q01581 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCS1Q01581 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCS1Q01581 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCS1Q01581 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCS1Q01581 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms