Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAE1P78406 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAE1P78406 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.9■□□□□ 0.46
RAE1P78406 AC233702.5-201ENST00000584107 538 ntBASIC17.9■□□□□ 0.46
RAE1P78406 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAE1P78406 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.89■□□□□ 0.46
RAE1P78406 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.89■□□□□ 0.46
RAE1P78406 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RAE1P78406 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAE1P78406 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.89■□□□□ 0.45
RAE1P78406 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.89■□□□□ 0.45
RAE1P78406 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.89■□□□□ 0.45
RAE1P78406 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAE1P78406 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RAE1P78406 AC012618.2-201ENST00000428058 849 ntBASIC17.89■□□□□ 0.45
RAE1P78406 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.89■□□□□ 0.45
RAE1P78406 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.89■□□□□ 0.45
RAE1P78406 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RAE1P78406 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.89■□□□□ 0.45
RAE1P78406 AC008622.2-201ENST00000617006 1229 ntBASIC17.89■□□□□ 0.45
RAE1P78406 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAE1P78406 AC096733.2-201ENST00000609937 1394 ntBASIC17.89■□□□□ 0.45
RAE1P78406 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAE1P78406 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAE1P78406 AL357033.4-201ENST00000617703 1807 ntBASIC17.88■□□□□ 0.45
RAE1P78406 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.88■□□□□ 0.45
RAE1P78406 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.88■□□□□ 0.45
RAE1P78406 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.88■□□□□ 0.45
RAE1P78406 Z99916.2-201ENST00000604037 246 ntBASIC17.88■□□□□ 0.45
RAE1P78406 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 AL049637.2-201ENST00000641778 930 ntBASIC17.88■□□□□ 0.45
RAE1P78406 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RAE1P78406 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 AC135050.7-201ENST00000624508 2218 ntBASIC17.88■□□□□ 0.45
RAE1P78406 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAE1P78406 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.88■□□□□ 0.45
RAE1P78406 RCC2P3-201ENST00000418112 1537 ntBASIC17.88■□□□□ 0.45
RAE1P78406 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RAE1P78406 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
RAE1P78406 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RAE1P78406 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.87■□□□□ 0.45
RAE1P78406 AC073592.3-201ENST00000625118 1834 ntBASIC17.87■□□□□ 0.45
RAE1P78406 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RAE1P78406 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAE1P78406 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms