Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.47■□□□□ 0.71
EIF3EP60228 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.47■□□□□ 0.71
EIF3EP60228 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.47■□□□□ 0.71
EIF3EP60228 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EIF3EP60228 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EIF3EP60228 AL353807.1-201ENST00000427475 662 ntBASIC19.46■□□□□ 0.71
EIF3EP60228 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
EIF3EP60228 PRSS44-201ENST00000515154 1146 ntBASIC19.46■□□□□ 0.71
EIF3EP60228 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.46■□□□□ 0.71
EIF3EP60228 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
EIF3EP60228 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 HEIH-201ENST00000623091 1652 ntBASIC19.46■□□□□ 0.71
EIF3EP60228 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EIF3EP60228 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.46■□□□□ 0.71
EIF3EP60228 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.45■□□□□ 0.7
EIF3EP60228 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
EIF3EP60228 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 KRT16P1-201ENST00000399124 1418 ntBASIC19.45■□□□□ 0.7
EIF3EP60228 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.45■□□□□ 0.7
EIF3EP60228 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.45■□□□□ 0.7
EIF3EP60228 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.45■□□□□ 0.7
EIF3EP60228 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EIF3EP60228 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 CR392000.1-201ENST00000624770 1228 ntBASIC19.45■□□□□ 0.7
EIF3EP60228 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.45■□□□□ 0.7
EIF3EP60228 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.45■□□□□ 0.7
EIF3EP60228 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.45■□□□□ 0.7
EIF3EP60228 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.45■□□□□ 0.7
EIF3EP60228 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
EIF3EP60228 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EIF3EP60228 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.44■□□□□ 0.7
EIF3EP60228 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.44■□□□□ 0.7
EIF3EP60228 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.44■□□□□ 0.7
EIF3EP60228 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EIF3EP60228 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
EIF3EP60228 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.44■□□□□ 0.7
EIF3EP60228 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3EP60228 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms