Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.85■□□□□ 0.29
CLDN17P56750 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN17P56750 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN17P56750 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 BCL2-203ENST00000589955 5011 ntBASIC16.84■□□□□ 0.29
CLDN17P56750 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN17P56750 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN17P56750 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 AC079598.2-202ENST00000546624 1451 ntBASIC16.84■□□□□ 0.29
CLDN17P56750 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN17P56750 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN17P56750 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN17P56750 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN17P56750 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN17P56750 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CLDN17P56750 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN17P56750 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CLDN17P56750 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN17P56750 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN17P56750 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN17P56750 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN17P56750 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN17P56750 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN17P56750 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN17P56750 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN17P56750 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLDN17P56750 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 MIR1238-201ENST00000408483 83 ntBASIC16.82■□□□□ 0.28
CLDN17P56750 AL390955.1-201ENST00000428694 934 ntBASIC16.82■□□□□ 0.28
CLDN17P56750 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 TSPY15P-201ENST00000457163 923 ntBASIC16.82■□□□□ 0.28
CLDN17P56750 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN17P56750 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN17P56750 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN17P56750 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN17P56750 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN17P56750 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN17P56750 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN17P56750 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms