Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN12P56749 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN12P56749 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN12P56749 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN12P56749 AC073210.2-201ENST00000430369 194 ntBASIC16.41■□□□□ 0.22
CLDN12P56749 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN12P56749 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN12P56749 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN12P56749 MIR6821-201ENST00000617625 74 ntBASIC16.41■□□□□ 0.22
CLDN12P56749 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN12P56749 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN12P56749 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN12P56749 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN12P56749 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLDN12P56749 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN12P56749 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN12P56749 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN12P56749 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN12P56749 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 AC073592.3-201ENST00000625118 1834 ntBASIC16.4■□□□□ 0.22
CLDN12P56749 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN12P56749 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CLDN12P56749 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN12P56749 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN12P56749 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN12P56749 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CLDN12P56749 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN12P56749 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN12P56749 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN12P56749 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.38■□□□□ 0.21
CLDN12P56749 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN12P56749 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN12P56749 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms