Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 AC036111.1-201ENST00000533973 1582 ntBASIC20.63■□□□□ 0.89
NCKAP1LP55160 AC093525.10-201ENST00000625130 1569 ntBASIC20.63■□□□□ 0.89
NCKAP1LP55160 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 AL138966.2-201ENST00000621997 464 ntBASIC20.63■□□□□ 0.89
NCKAP1LP55160 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NCKAP1LP55160 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1LP55160 CROCCP3-202ENST00000420820 1947 ntBASIC20.63■□□□□ 0.89
NCKAP1LP55160 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 AC005521.1-201ENST00000393351 872 ntBASIC20.62■□□□□ 0.89
NCKAP1LP55160 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 AL512604.3-201ENST00000569583 964 ntBASIC20.62■□□□□ 0.89
NCKAP1LP55160 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKAP1LP55160 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1LP55160 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 MIR564-202ENST00000385049 94 ntBASIC20.61■□□□□ 0.89
NCKAP1LP55160 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
NCKAP1LP55160 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1LP55160 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.6■□□□□ 0.89
NCKAP1LP55160 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 AL357033.4-201ENST00000617703 1807 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms