Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.85■□□□□ 0.45
NR1H2P55055 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 AL512353.2-201ENST00000448759 1962 ntBASIC17.85■□□□□ 0.45
NR1H2P55055 RPS2P52-201ENST00000469610 820 ntBASIC17.85■□□□□ 0.45
NR1H2P55055 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 AC006058.3-201ENST00000606217 1069 ntBASIC17.85■□□□□ 0.45
NR1H2P55055 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NR1H2P55055 AP006294.2-201ENST00000641667 209 ntBASIC17.85■□□□□ 0.45
NR1H2P55055 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
NR1H2P55055 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NR1H2P55055 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H2P55055 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NR1H2P55055 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.84■□□□□ 0.45
NR1H2P55055 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H2P55055 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H2P55055 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H2P55055 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.84■□□□□ 0.45
NR1H2P55055 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H2P55055 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H2P55055 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H2P55055 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H2P55055 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H2P55055 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H2P55055 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.83■□□□□ 0.45
NR1H2P55055 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.83■□□□□ 0.45
NR1H2P55055 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H2P55055 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.83■□□□□ 0.45
NR1H2P55055 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.83■□□□□ 0.44
NR1H2P55055 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.83■□□□□ 0.44
NR1H2P55055 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NR1H2P55055 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.83■□□□□ 0.44
NR1H2P55055 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H2P55055 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
NR1H2P55055 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.83■□□□□ 0.44
NR1H2P55055 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
NR1H2P55055 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H2P55055 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H2P55055 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H2P55055 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
NR1H2P55055 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms