Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.25■□□□□ 0.51
CLCN2P51788 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CLCN2P51788 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.25■□□□□ 0.51
CLCN2P51788 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCN2P51788 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CLCN2P51788 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CLCN2P51788 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.25■□□□□ 0.51
CLCN2P51788 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN2P51788 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN2P51788 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN2P51788 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN2P51788 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLCN2P51788 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLCN2P51788 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLCN2P51788 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN2P51788 TUBB8P6-201ENST00000436895 1288 ntBASIC18.24■□□□□ 0.51
CLCN2P51788 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN2P51788 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.24■□□□□ 0.51
CLCN2P51788 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN2P51788 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN2P51788 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN2P51788 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN2P51788 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLCN2P51788 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLCN2P51788 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.23■□□□□ 0.51
CLCN2P51788 AL596275.1-201ENST00000423464 877 ntBASIC18.23■□□□□ 0.51
CLCN2P51788 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 MIR4497-201ENST00000583208 89 ntBASIC18.23■□□□□ 0.51
CLCN2P51788 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 AL049637.2-201ENST00000641778 930 ntBASIC18.23■□□□□ 0.51
CLCN2P51788 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLCN2P51788 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN2P51788 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN2P51788 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN2P51788 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN2P51788 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN2P51788 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms