Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HTR3AP46098 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR3AP46098 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.4■□□□□ 0.38
HTR3AP46098 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.4■□□□□ 0.38
HTR3AP46098 AL158047.1-201ENST00000445918 881 ntBASIC17.4■□□□□ 0.38
HTR3AP46098 AC098590.1-201ENST00000468126 897 ntBASIC17.4■□□□□ 0.38
HTR3AP46098 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR3AP46098 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.4■□□□□ 0.38
HTR3AP46098 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.4■□□□□ 0.38
HTR3AP46098 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HTR3AP46098 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR3AP46098 AL031985.4-201ENST00000642138 673 ntBASIC17.4■□□□□ 0.38
HTR3AP46098 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 LINC01465-201ENST00000408887 1940 ntBASIC17.4■□□□□ 0.38
HTR3AP46098 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HTR3AP46098 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR3AP46098 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR3AP46098 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR3AP46098 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
HTR3AP46098 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HTR3AP46098 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR3AP46098 AC009113.1-201ENST00000570267 2443 ntBASIC17.39■□□□□ 0.37
HTR3AP46098 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HTR3AP46098 AC004980.1-204ENST00000429707 299 ntBASIC17.39■□□□□ 0.37
HTR3AP46098 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HTR3AP46098 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.39■□□□□ 0.37
HTR3AP46098 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.39■□□□□ 0.37
HTR3AP46098 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR3AP46098 TMEM191A-211ENST00000637163 1067 ntBASIC17.39■□□□□ 0.37
HTR3AP46098 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HTR3AP46098 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HTR3AP46098 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR3AP46098 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HTR3AP46098 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.38■□□□□ 0.37
HTR3AP46098 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 RPS2P4-201ENST00000476944 856 ntBASIC17.38■□□□□ 0.37
HTR3AP46098 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 Z85996.1-201ENST00000494644 937 ntBASIC17.38■□□□□ 0.37
HTR3AP46098 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.38■□□□□ 0.37
HTR3AP46098 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HTR3AP46098 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HTR3AP46098 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR3AP46098 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR3AP46098 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms