Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.92■□□□□ 0.78
CTNNA1P35221 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.92■□□□□ 0.78
CTNNA1P35221 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNNA1P35221 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNNA1P35221 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTNNA1P35221 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.92■□□□□ 0.78
CTNNA1P35221 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.92■□□□□ 0.78
CTNNA1P35221 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNNA1P35221 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNNA1P35221 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CTNNA1P35221 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNNA1P35221 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTNNA1P35221 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNNA1P35221 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNNA1P35221 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNNA1P35221 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNNA1P35221 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.91■□□□□ 0.78
CTNNA1P35221 AC090192.1-201ENST00000517740 490 ntBASIC19.91■□□□□ 0.78
CTNNA1P35221 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CTNNA1P35221 AC004264.1-201ENST00000608354 794 ntBASIC19.91■□□□□ 0.78
CTNNA1P35221 AC092666.2-201ENST00000613287 246 ntBASIC19.91■□□□□ 0.78
CTNNA1P35221 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.91■□□□□ 0.78
CTNNA1P35221 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CTNNA1P35221 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.91■□□□□ 0.78
CTNNA1P35221 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNNA1P35221 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNNA1P35221 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTNNA1P35221 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 BICD1-207ENST00000551848 1962 ntBASIC19.9■□□□□ 0.78
CTNNA1P35221 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.9■□□□□ 0.78
CTNNA1P35221 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 MTDHP1-201ENST00000605323 784 ntBASIC19.9■□□□□ 0.78
CTNNA1P35221 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNNA1P35221 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNNA1P35221 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNNA1P35221 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.89■□□□□ 0.78
CTNNA1P35221 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.89■□□□□ 0.78
CTNNA1P35221 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTNNA1P35221 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.89■□□□□ 0.77
CTNNA1P35221 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTNNA1P35221 AL355802.2-201ENST00000402069 882 ntBASIC19.89■□□□□ 0.77
CTNNA1P35221 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.89■□□□□ 0.77
CTNNA1P35221 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNNA1P35221 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.89■□□□□ 0.77
CTNNA1P35221 AP003097.1-201ENST00000530657 1135 ntBASIC19.89■□□□□ 0.77
CTNNA1P35221 KRT8P41-201ENST00000533985 1514 ntBASIC19.89■□□□□ 0.77
CTNNA1P35221 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.89■□□□□ 0.77
CTNNA1P35221 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNNA1P35221 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNNA1P35221 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.89■□□□□ 0.77
CTNNA1P35221 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNNA1P35221 AC069544.1-201ENST00000609399 999 ntBASIC19.89■□□□□ 0.77
CTNNA1P35221 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.89■□□□□ 0.77
CTNNA1P35221 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms