Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LMO1P25800 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LMO1P25800 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.85■□□□□ 0.13
LMO1P25800 UBE2SP1-201ENST00000450587 669 ntBASIC15.85■□□□□ 0.13
LMO1P25800 AC093827.2-201ENST00000512654 315 ntBASIC15.85■□□□□ 0.13
LMO1P25800 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.85■□□□□ 0.13
LMO1P25800 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.85■□□□□ 0.13
LMO1P25800 AC142381.4-202ENST00000563973 229 ntBASIC15.85■□□□□ 0.13
LMO1P25800 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LMO1P25800 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.85■□□□□ 0.13
LMO1P25800 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 KRT8P3-201ENST00000519669 1449 ntBASIC15.85■□□□□ 0.13
LMO1P25800 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LMO1P25800 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.84■□□□□ 0.13
LMO1P25800 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
LMO1P25800 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.84■□□□□ 0.13
LMO1P25800 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.84■□□□□ 0.13
LMO1P25800 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.84■□□□□ 0.13
LMO1P25800 AC011298.2-201ENST00000617989 482 ntBASIC15.84■□□□□ 0.13
LMO1P25800 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO1P25800 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.84■□□□□ 0.13
LMO1P25800 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 FSCN1P1-201ENST00000568912 1481 ntBASIC15.84■□□□□ 0.13
LMO1P25800 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO1P25800 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO1P25800 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO1P25800 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO1P25800 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO1P25800 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 AC008040.2-201ENST00000461049 708 ntBASIC15.83■□□□□ 0.12
LMO1P25800 AC011506.1-201ENST00000474329 610 ntBASIC15.83■□□□□ 0.12
LMO1P25800 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 CKBP1-201ENST00000565489 1086 ntBASIC15.83■□□□□ 0.12
LMO1P25800 MIR6786-201ENST00000616843 113 ntBASIC15.83■□□□□ 0.12
LMO1P25800 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO1P25800 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LMO1P25800 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.83■□□□□ 0.12
LMO1P25800 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO1P25800 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO1P25800 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO1P25800 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LMO1P25800 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO1P25800 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms