Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCNCP24863 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 RCC2P3-201ENST00000418112 1537 ntBASIC19.21■□□□□ 0.67
CCNCP24863 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.21■□□□□ 0.67
CCNCP24863 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCNCP24863 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.21■□□□□ 0.67
CCNCP24863 AL390955.1-201ENST00000428694 934 ntBASIC19.21■□□□□ 0.67
CCNCP24863 TSPY15P-201ENST00000457163 923 ntBASIC19.21■□□□□ 0.67
CCNCP24863 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNCP24863 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNCP24863 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNCP24863 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCNCP24863 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNCP24863 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNCP24863 MTMR9LP-203ENST00000426597 1545 ntBASIC19.2■□□□□ 0.66
CCNCP24863 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCNCP24863 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNCP24863 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCNCP24863 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNCP24863 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNCP24863 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 AL023803.3-201ENST00000615559 522 ntBASIC19.2■□□□□ 0.66
CCNCP24863 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNCP24863 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CCNCP24863 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.2■□□□□ 0.66
CCNCP24863 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNCP24863 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNCP24863 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNCP24863 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 TSPY17P-201ENST00000450329 467 ntBASIC19.19■□□□□ 0.66
CCNCP24863 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNCP24863 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.19■□□□□ 0.66
CCNCP24863 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCNCP24863 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNCP24863 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 AL109659.2-201ENST00000606809 1674 ntBASIC19.19■□□□□ 0.66
CCNCP24863 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNCP24863 ANO7L1-203ENST00000602586 1720 ntBASIC19.19■□□□□ 0.66
CCNCP24863 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCNCP24863 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNCP24863 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNCP24863 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.18■□□□□ 0.66
CCNCP24863 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 C2orf69P3-201ENST00000565542 1120 ntBASIC19.18■□□□□ 0.66
CCNCP24863 AL353719.1-201ENST00000566847 864 ntBASIC19.18■□□□□ 0.66
CCNCP24863 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNCP24863 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNCP24863 AL020996.1-203ENST00000536896 2307 ntBASIC19.18■□□□□ 0.66
CCNCP24863 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCNCP24863 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCNCP24863 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNCP24863 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.17■□□□□ 0.66
CCNCP24863 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNCP24863 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.17■□□□□ 0.66
CCNCP24863 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNCP24863 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCNCP24863 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNCP24863 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNCP24863 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNCP24863 MMP23A-201ENST00000234610 1017 ntBASIC19.17■□□□□ 0.66
CCNCP24863 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms