Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
XPAP23025 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.03■□□□□ 0.64
XPAP23025 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
XPAP23025 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.03■□□□□ 0.64
XPAP23025 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
XPAP23025 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XPAP23025 AC141586.3-201ENST00000562166 1838 ntBASIC19.02■□□□□ 0.64
XPAP23025 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
XPAP23025 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
XPAP23025 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
XPAP23025 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
XPAP23025 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
XPAP23025 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XPAP23025 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.02■□□□□ 0.64
XPAP23025 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
XPAP23025 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
XPAP23025 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.02■□□□□ 0.64
XPAP23025 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
XPAP23025 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
XPAP23025 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.02■□□□□ 0.63
XPAP23025 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
XPAP23025 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
XPAP23025 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.01■□□□□ 0.63
XPAP23025 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XPAP23025 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.01■□□□□ 0.63
XPAP23025 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XPAP23025 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.01■□□□□ 0.63
XPAP23025 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.01■□□□□ 0.63
XPAP23025 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.01■□□□□ 0.63
XPAP23025 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
XPAP23025 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
XPAP23025 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XPAP23025 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
XPAP23025 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 FEM1AP3-201ENST00000403722 1741 ntBASIC19■□□□□ 0.63
XPAP23025 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
XPAP23025 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19■□□□□ 0.63
XPAP23025 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19■□□□□ 0.63
XPAP23025 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19■□□□□ 0.63
XPAP23025 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19■□□□□ 0.63
XPAP23025 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19■□□□□ 0.63
XPAP23025 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19■□□□□ 0.63
XPAP23025 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19■□□□□ 0.63
XPAP23025 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 KATNBL1P6-202ENST00000562413 1466 ntBASIC19■□□□□ 0.63
XPAP23025 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
XPAP23025 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 IRX1P1-201ENST00000438849 1838 ntBASIC19■□□□□ 0.63
XPAP23025 UBQLN4P1-201ENST00000461599 1801 ntBASIC19■□□□□ 0.63
XPAP23025 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
XPAP23025 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XPAP23025 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
XPAP23025 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.99■□□□□ 0.63
XPAP23025 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 MIR1224-201ENST00000408193 85 ntBASIC18.99■□□□□ 0.63
XPAP23025 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
XPAP23025 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.99■□□□□ 0.63
XPAP23025 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.99■□□□□ 0.63
XPAP23025 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
XPAP23025 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.99■□□□□ 0.63
XPAP23025 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms