Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCN1P20061 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TCN1P20061 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TCN1P20061 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.11■□□□□ 0.49
TCN1P20061 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TCN1P20061 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.11■□□□□ 0.49
TCN1P20061 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.11■□□□□ 0.49
TCN1P20061 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TCN1P20061 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
TCN1P20061 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCN1P20061 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
TCN1P20061 AC139713.2-201ENST00000641328 2723 ntBASIC18.11■□□□□ 0.49
TCN1P20061 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.1■□□□□ 0.49
TCN1P20061 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 AC006015.1-201ENST00000429970 570 ntBASIC18.1■□□□□ 0.49
TCN1P20061 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.1■□□□□ 0.49
TCN1P20061 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.1■□□□□ 0.49
TCN1P20061 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 AC011767.1-201ENST00000617410 1153 ntBASIC18.1■□□□□ 0.49
TCN1P20061 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCN1P20061 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.1■□□□□ 0.49
TCN1P20061 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.1■□□□□ 0.49
TCN1P20061 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TCN1P20061 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.09■□□□□ 0.49
TCN1P20061 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TCN1P20061 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.09■□□□□ 0.49
TCN1P20061 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.09■□□□□ 0.49
TCN1P20061 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TCN1P20061 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.09■□□□□ 0.49
TCN1P20061 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCN1P20061 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TCN1P20061 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.08■□□□□ 0.49
TCN1P20061 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCN1P20061 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TCN1P20061 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCN1P20061 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCN1P20061 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms