Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 AL162727.3-201ENST00000635661 2787 ntBASIC18.21■□□□□ 0.51
LINGO3P0C6S8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINGO3P0C6S8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LINGO3P0C6S8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LINGO3P0C6S8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 AC073592.3-201ENST00000625118 1834 ntBASIC18.19■□□□□ 0.5
LINGO3P0C6S8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 AC060766.5-201ENST00000590539 871 ntBASIC18.19■□□□□ 0.5
LINGO3P0C6S8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.19■□□□□ 0.5
LINGO3P0C6S8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINGO3P0C6S8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms