Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
APPP05067 AC113347.1-201ENST00000413321 391 ntBASIC22.6■■□□□ 1.21
APPP05067 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.6■■□□□ 1.21
APPP05067 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.6■■□□□ 1.21
APPP05067 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
APPP05067 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.6■■□□□ 1.21
APPP05067 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.6■■□□□ 1.21
APPP05067 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.6■■□□□ 1.21
APPP05067 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
APPP05067 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.6■■□□□ 1.21
APPP05067 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.6■■□□□ 1.21
APPP05067 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.6■■□□□ 1.21
APPP05067 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
APPP05067 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.59■■□□□ 1.21
APPP05067 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.59■■□□□ 1.21
APPP05067 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.59■■□□□ 1.21
APPP05067 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.59■■□□□ 1.21
APPP05067 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
APPP05067 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
APPP05067 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.59■■□□□ 1.21
APPP05067 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
APPP05067 HMGA1P5-201ENST00000412453 271 ntBASIC22.59■■□□□ 1.21
APPP05067 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.59■■□□□ 1.21
APPP05067 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.59■■□□□ 1.21
APPP05067 ATP5G1P1-201ENST00000448724 379 ntBASIC22.59■■□□□ 1.21
APPP05067 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.59■■□□□ 1.21
APPP05067 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.59■■□□□ 1.21
APPP05067 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
APPP05067 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.59■■□□□ 1.21
APPP05067 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
APPP05067 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.59■■□□□ 1.21
APPP05067 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
APPP05067 KRT8P3-201ENST00000519669 1449 ntBASIC22.58■■□□□ 1.21
APPP05067 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
APPP05067 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.58■■□□□ 1.21
APPP05067 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.58■■□□□ 1.21
APPP05067 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.58■■□□□ 1.21
APPP05067 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.58■■□□□ 1.21
APPP05067 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.58■■□□□ 1.21
APPP05067 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.58■■□□□ 1.21
APPP05067 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
APPP05067 AC010203.1-204ENST00000548782 407 ntBASIC22.58■■□□□ 1.21
APPP05067 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
APPP05067 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
APPP05067 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
APPP05067 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
APPP05067 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.57■■□□□ 1.2
APPP05067 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
APPP05067 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
APPP05067 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.57■■□□□ 1.2
APPP05067 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
APPP05067 RCN1P1-201ENST00000400413 996 ntBASIC22.57■■□□□ 1.2
APPP05067 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
APPP05067 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.57■■□□□ 1.2
APPP05067 KRT18P57-201ENST00000443599 1254 ntBASIC22.57■■□□□ 1.2
APPP05067 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.57■■□□□ 1.2
APPP05067 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
APPP05067 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.57■■□□□ 1.2
APPP05067 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.57■■□□□ 1.2
APPP05067 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
APPP05067 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
APPP05067 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.57■■□□□ 1.2
APPP05067 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
APPP05067 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
APPP05067 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
APPP05067 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms