Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 C1QL1P1-201ENST00000568105 661 ntBASIC17.64■□□□□ 0.41
OPN1SWP03999 AC142086.2-201ENST00000569753 217 ntBASIC17.64■□□□□ 0.41
OPN1SWP03999 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.64■□□□□ 0.41
OPN1SWP03999 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.64■□□□□ 0.41
OPN1SWP03999 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.64■□□□□ 0.41
OPN1SWP03999 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 AL354751.1-201ENST00000412768 1863 ntBASIC17.64■□□□□ 0.41
OPN1SWP03999 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
OPN1SWP03999 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.64■□□□□ 0.41
OPN1SWP03999 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
OPN1SWP03999 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
OPN1SWP03999 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
OPN1SWP03999 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPN1SWP03999 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
OPN1SWP03999 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.63■□□□□ 0.41
OPN1SWP03999 AC126763.1-201ENST00000552015 2118 ntBASIC17.63■□□□□ 0.41
OPN1SWP03999 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.63■□□□□ 0.41
OPN1SWP03999 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
OPN1SWP03999 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.63■□□□□ 0.41
OPN1SWP03999 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.63■□□□□ 0.41
OPN1SWP03999 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.63■□□□□ 0.41
OPN1SWP03999 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.63■□□□□ 0.41
OPN1SWP03999 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.63■□□□□ 0.41
OPN1SWP03999 UNC93B5-201ENST00000530315 699 ntBASIC17.63■□□□□ 0.41
OPN1SWP03999 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.63■□□□□ 0.41
OPN1SWP03999 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.63■□□□□ 0.41
OPN1SWP03999 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
OPN1SWP03999 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
OPN1SWP03999 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPN1SWP03999 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
OPN1SWP03999 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.62■□□□□ 0.41
OPN1SWP03999 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 AL355802.2-201ENST00000402069 882 ntBASIC17.62■□□□□ 0.41
OPN1SWP03999 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.62■□□□□ 0.41
OPN1SWP03999 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 AC008403.3-201ENST00000598924 454 ntBASIC17.62■□□□□ 0.41
OPN1SWP03999 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.62■□□□□ 0.41
OPN1SWP03999 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPN1SWP03999 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.61■□□□□ 0.41
OPN1SWP03999 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.61■□□□□ 0.41
OPN1SWP03999 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.61■□□□□ 0.41
OPN1SWP03999 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.61■□□□□ 0.41
OPN1SWP03999 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.61■□□□□ 0.41
OPN1SWP03999 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.61■□□□□ 0.41
OPN1SWP03999 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPN1SWP03999 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.61■□□□□ 0.41
OPN1SWP03999 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms