Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AC087633.2-202ENST00000565166 1439 ntBASIC14.19□□□□□ -0.14
HLA-DQA1P01909 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AC083906.6-201ENST00000641366 219 ntBASIC14.19□□□□□ -0.14
HLA-DQA1P01909 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQA1P01909 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 ZNRF2P3-201ENST00000424200 374 ntBASIC14.17□□□□□ -0.14
HLA-DQA1P01909 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQA1P01909 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms