Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
IFNA1P01562 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.94□□□□□ -0.02
IFNA1P01562 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
IFNA1P01562 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.94□□□□□ -0.02
IFNA1P01562 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.94□□□□□ -0.02
IFNA1P01562 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.94□□□□□ -0.02
IFNA1P01562 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.94□□□□□ -0.02
IFNA1P01562 KRT18P20-201ENST00000548986 1279 ntBASIC14.94□□□□□ -0.02
IFNA1P01562 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 TPRG1LP1-201ENST00000598702 760 ntBASIC14.94□□□□□ -0.02
IFNA1P01562 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.94□□□□□ -0.02
IFNA1P01562 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.94□□□□□ -0.02
IFNA1P01562 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.93□□□□□ -0.02
IFNA1P01562 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
IFNA1P01562 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.93□□□□□ -0.02
IFNA1P01562 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.93□□□□□ -0.02
IFNA1P01562 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
IFNA1P01562 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.93□□□□□ -0.02
IFNA1P01562 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
IFNA1P01562 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
IFNA1P01562 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 AC134043.2-201ENST00000624206 2238 ntBASIC14.93□□□□□ -0.02
IFNA1P01562 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
IFNA1P01562 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IFNA1P01562 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.93□□□□□ -0.02
IFNA1P01562 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
IFNA1P01562 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
IFNA1P01562 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.92□□□□□ -0.02
IFNA1P01562 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 SLC25A6P5-201ENST00000435663 894 ntBASIC14.92□□□□□ -0.02
IFNA1P01562 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 AC012414.1-201ENST00000556676 535 ntBASIC14.92□□□□□ -0.02
IFNA1P01562 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.92□□□□□ -0.02
IFNA1P01562 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 CYP21A1P-202ENST00000354927 1481 ntBASIC14.92□□□□□ -0.02
IFNA1P01562 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
IFNA1P01562 AC106820.2-201ENST00000563775 3264 ntBASIC14.92□□□□□ -0.02
IFNA1P01562 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.92□□□□□ -0.02
IFNA1P01562 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.92□□□□□ -0.02
IFNA1P01562 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
IFNA1P01562 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
IFNA1P01562 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IFNA1P01562 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
IFNA1P01562 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 AC099398.1-201ENST00000567919 2776 ntBASIC14.91□□□□□ -0.02
IFNA1P01562 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 AC141586.5-201ENST00000624546 2050 ntBASIC14.91□□□□□ -0.02
IFNA1P01562 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms