Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP1R3DO95685 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PPP1R3DO95685 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 ID1-201ENST00000376105 1233 ntBASIC17.06■□□□□ 0.32
PPP1R3DO95685 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 KRT17P3-201ENST00000420566 1262 ntBASIC17.06■□□□□ 0.32
PPP1R3DO95685 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP1R3DO95685 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 KRT8P41-201ENST00000533985 1514 ntBASIC17.06■□□□□ 0.32
PPP1R3DO95685 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP1R3DO95685 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AC018470.1-201ENST00000624790 3129 ntBASIC17.05■□□□□ 0.32
PPP1R3DO95685 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.05■□□□□ 0.32
PPP1R3DO95685 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AL023875.1-201ENST00000640777 796 ntBASIC17.05■□□□□ 0.32
PPP1R3DO95685 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP1R3DO95685 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.05■□□□□ 0.32
PPP1R3DO95685 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 KRASP1-201ENST00000407852 552 ntBASIC17.04■□□□□ 0.32
PPP1R3DO95685 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AC026366.1-201ENST00000488803 879 ntBASIC17.04■□□□□ 0.32
PPP1R3DO95685 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP1R3DO95685 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP1R3DO95685 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms