Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CLSTN1O94985 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 ZNF815P-204ENST00000434898 1737 ntBASIC20.87■□□□□ 0.93
CLSTN1O94985 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLSTN1O94985 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLSTN1O94985 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLSTN1O94985 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLSTN1O94985 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.86■□□□□ 0.93
CLSTN1O94985 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLSTN1O94985 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.86■□□□□ 0.93
CLSTN1O94985 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 OR6D1P-203ENST00000641209 4860 ntBASIC20.86■□□□□ 0.93
CLSTN1O94985 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLSTN1O94985 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLSTN1O94985 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
CLSTN1O94985 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.85■□□□□ 0.93
CLSTN1O94985 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
CLSTN1O94985 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 FAM197Y1-201ENST00000421178 764 ntBASIC20.85■□□□□ 0.93
CLSTN1O94985 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.85■□□□□ 0.93
CLSTN1O94985 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.85■□□□□ 0.93
CLSTN1O94985 AF186192.3-201ENST00000583427 947 ntBASIC20.85■□□□□ 0.93
CLSTN1O94985 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
CLSTN1O94985 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.85■□□□□ 0.93
CLSTN1O94985 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLSTN1O94985 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLSTN1O94985 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.85■□□□□ 0.93
CLSTN1O94985 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 NIFKP9-201ENST00000419265 221 ntBASIC20.84■□□□□ 0.93
CLSTN1O94985 RPS2P4-201ENST00000476944 856 ntBASIC20.84■□□□□ 0.93
CLSTN1O94985 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.84■□□□□ 0.93
CLSTN1O94985 AP001412.1-201ENST00000608405 714 ntBASIC20.84■□□□□ 0.93
CLSTN1O94985 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.84■□□□□ 0.93
CLSTN1O94985 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.84■□□□□ 0.93
CLSTN1O94985 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.84■□□□□ 0.93
CLSTN1O94985 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLSTN1O94985 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
CLSTN1O94985 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms