Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.09■□□□□ 0.65
USP1O94782 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.08■□□□□ 0.65
USP1O94782 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.65
USP1O94782 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
USP1O94782 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 ANO7L1-203ENST00000602586 1720 ntBASIC19.08■□□□□ 0.65
USP1O94782 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.08■□□□□ 0.65
USP1O94782 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.08■□□□□ 0.65
USP1O94782 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.08■□□□□ 0.65
USP1O94782 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.08■□□□□ 0.65
USP1O94782 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
USP1O94782 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP1O94782 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.08■□□□□ 0.64
USP1O94782 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.08■□□□□ 0.64
USP1O94782 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
USP1O94782 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
USP1O94782 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
USP1O94782 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP1O94782 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
USP1O94782 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.07■□□□□ 0.64
USP1O94782 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 AC128676.1-201ENST00000454392 318 ntBASIC19.07■□□□□ 0.64
USP1O94782 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.07■□□□□ 0.64
USP1O94782 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.07■□□□□ 0.64
USP1O94782 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 AC104581.1-202ENST00000635932 2618 ntBASIC19.07■□□□□ 0.64
USP1O94782 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
USP1O94782 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.07■□□□□ 0.64
USP1O94782 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP1O94782 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.06■□□□□ 0.64
USP1O94782 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.06■□□□□ 0.64
USP1O94782 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 AC090164.3-201ENST00000610780 2143 ntBASIC19.06■□□□□ 0.64
USP1O94782 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 NIFKP9-201ENST00000419265 221 ntBASIC19.06■□□□□ 0.64
USP1O94782 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms