Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCN2BO60939 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN2BO60939 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 AL390961.4-201ENST00000623958 2535 ntBASIC17.9■□□□□ 0.46
SCN2BO60939 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 KRASP1-201ENST00000407852 552 ntBASIC17.9■□□□□ 0.46
SCN2BO60939 AC133681.1-201ENST00000465482 601 ntBASIC17.9■□□□□ 0.46
SCN2BO60939 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
SCN2BO60939 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN2BO60939 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN2BO60939 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN2BO60939 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN2BO60939 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN2BO60939 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN2BO60939 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SCN2BO60939 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN2BO60939 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN2BO60939 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCN2BO60939 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCN2BO60939 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.89■□□□□ 0.46
SCN2BO60939 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SCN2BO60939 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN2BO60939 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.89■□□□□ 0.45
SCN2BO60939 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN2BO60939 AC124016.1-201ENST00000609552 612 ntBASIC17.89■□□□□ 0.45
SCN2BO60939 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 AL445675.2-201ENST00000620291 557 ntBASIC17.89■□□□□ 0.45
SCN2BO60939 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SCN2BO60939 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN2BO60939 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN2BO60939 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN2BO60939 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN2BO60939 AC079598.2-202ENST00000546624 1451 ntBASIC17.88■□□□□ 0.45
SCN2BO60939 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 AL354751.1-201ENST00000412768 1863 ntBASIC17.88■□□□□ 0.45
SCN2BO60939 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCN2BO60939 RCC2P6-201ENST00000526625 1557 ntBASIC17.88■□□□□ 0.45
SCN2BO60939 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN2BO60939 HEIH-201ENST00000623091 1652 ntBASIC17.88■□□□□ 0.45
SCN2BO60939 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SCN2BO60939 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN2BO60939 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN2BO60939 KRT18P6-201ENST00000555540 1265 ntBASIC17.88■□□□□ 0.45
SCN2BO60939 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCN2BO60939 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.88■□□□□ 0.45
SCN2BO60939 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCN2BO60939 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SCN2BO60939 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SCN2BO60939 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN2BO60939 AC020763.4-201ENST00000623414 4170 ntBASIC17.87■□□□□ 0.45
SCN2BO60939 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms