Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 HMGA1P5-201ENST00000412453 271 ntBASIC16.82■□□□□ 0.28
CYTIPO60759 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.82■□□□□ 0.28
CYTIPO60759 SLC25A3P1-201ENST00000443844 931 ntBASIC16.82■□□□□ 0.28
CYTIPO60759 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.82■□□□□ 0.28
CYTIPO60759 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.82■□□□□ 0.28
CYTIPO60759 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.82■□□□□ 0.28
CYTIPO60759 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.82■□□□□ 0.28
CYTIPO60759 AC005363.2-201ENST00000618631 242 ntBASIC16.82■□□□□ 0.28
CYTIPO60759 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.82■□□□□ 0.28
CYTIPO60759 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CYTIPO60759 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.82■□□□□ 0.28
CYTIPO60759 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYTIPO60759 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CYTIPO60759 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
CYTIPO60759 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
CYTIPO60759 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
CYTIPO60759 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CYTIPO60759 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.81■□□□□ 0.28
CYTIPO60759 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CYTIPO60759 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CYTIPO60759 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 AL512353.2-201ENST00000448759 1962 ntBASIC16.8■□□□□ 0.28
CYTIPO60759 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CYTIPO60759 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
CYTIPO60759 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.8■□□□□ 0.28
CYTIPO60759 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.8■□□□□ 0.28
CYTIPO60759 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CYTIPO60759 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.8■□□□□ 0.28
CYTIPO60759 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CYTIPO60759 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
CYTIPO60759 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 AL049812.1-201ENST00000432563 2267 ntBASIC16.79■□□□□ 0.28
CYTIPO60759 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 AC113347.1-201ENST00000413321 391 ntBASIC16.79■□□□□ 0.28
CYTIPO60759 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 AL512604.3-201ENST00000569583 964 ntBASIC16.79■□□□□ 0.28
CYTIPO60759 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CYTIPO60759 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CYTIPO60759 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.79■□□□□ 0.28
CYTIPO60759 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CYTIPO60759 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
CYTIPO60759 KRT8P32-201ENST00000512863 1461 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms