Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RRP8O43159 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RRP8O43159 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.7■□□□□ 0.42
RRP8O43159 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 SMG8-203ENST00000578922 2178 ntBASIC17.7■□□□□ 0.42
RRP8O43159 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.7■□□□□ 0.42
RRP8O43159 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
RRP8O43159 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.7■□□□□ 0.42
RRP8O43159 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.7■□□□□ 0.42
RRP8O43159 KRT18P58-201ENST00000527480 1120 ntBASIC17.7■□□□□ 0.42
RRP8O43159 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RRP8O43159 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.7■□□□□ 0.42
RRP8O43159 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.7■□□□□ 0.42
RRP8O43159 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.7■□□□□ 0.42
RRP8O43159 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.7■□□□□ 0.42
RRP8O43159 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.7■□□□□ 0.42
RRP8O43159 AC079602.3-201ENST00000623931 403 ntBASIC17.7■□□□□ 0.42
RRP8O43159 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 AL391807.1-203ENST00000604392 2365 ntBASIC17.7■□□□□ 0.42
RRP8O43159 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.7■□□□□ 0.42
RRP8O43159 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RRP8O43159 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RRP8O43159 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.7■□□□□ 0.42
RRP8O43159 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 GABARAPL3-202ENST00000624044 1851 ntBASIC17.69■□□□□ 0.42
RRP8O43159 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.69■□□□□ 0.42
RRP8O43159 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.69■□□□□ 0.42
RRP8O43159 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
RRP8O43159 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.69■□□□□ 0.42
RRP8O43159 AC092183.1-201ENST00000469884 875 ntBASIC17.69■□□□□ 0.42
RRP8O43159 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.69■□□□□ 0.42
RRP8O43159 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 AC099336.1-202ENST00000602961 463 ntBASIC17.69■□□□□ 0.42
RRP8O43159 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RRP8O43159 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RRP8O43159 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RRP8O43159 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.69■□□□□ 0.42
RRP8O43159 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.69■□□□□ 0.42
RRP8O43159 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RRP8O43159 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
RRP8O43159 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.68■□□□□ 0.42
RRP8O43159 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.68■□□□□ 0.42
RRP8O43159 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.68■□□□□ 0.42
RRP8O43159 SAPCD2P3-201ENST00000455031 850 ntBASIC17.68■□□□□ 0.42
RRP8O43159 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.68■□□□□ 0.42
RRP8O43159 AC036111.1-201ENST00000533973 1582 ntBASIC17.68■□□□□ 0.42
RRP8O43159 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.68■□□□□ 0.42
RRP8O43159 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
RRP8O43159 AL157888.1-201ENST00000631930 593 ntBASIC17.68■□□□□ 0.42
RRP8O43159 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RRP8O43159 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RRP8O43159 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.68■□□□□ 0.42
RRP8O43159 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RRP8O43159 IL9RP2-201ENST00000423948 1312 ntBASIC17.68■□□□□ 0.42
RRP8O43159 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
RRP8O43159 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
RRP8O43159 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.68■□□□□ 0.42
RRP8O43159 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms