Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
ATP2A1O14983 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
ATP2A1O14983 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP2A1O14983 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ATP2A1O14983 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
ATP2A1O14983 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ATP2A1O14983 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP2A1O14983 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 FEM1AP3-201ENST00000403722 1741 ntBASIC21.59■■□□□ 1.05
ATP2A1O14983 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ATP2A1O14983 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP2A1O14983 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ATP2A1O14983 KRT8P7-201ENST00000533003 1432 ntBASIC21.59■■□□□ 1.05
ATP2A1O14983 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.59■■□□□ 1.05
ATP2A1O14983 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP2A1O14983 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.59■■□□□ 1.05
ATP2A1O14983 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP2A1O14983 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ATP2A1O14983 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP2A1O14983 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2A1O14983 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATP2A1O14983 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
ATP2A1O14983 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ATP2A1O14983 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2A1O14983 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2A1O14983 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 HCG4P8-203ENST00000443049 980 ntBASIC21.58■■□□□ 1.05
ATP2A1O14983 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2A1O14983 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
ATP2A1O14983 NPAP1P7-201ENST00000613027 823 ntBASIC21.58■■□□□ 1.05
ATP2A1O14983 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2A1O14983 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP2A1O14983 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP2A1O14983 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP2A1O14983 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP2A1O14983 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP2A1O14983 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP2A1O14983 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 HOXB1-202ENST00000577092 1414 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
ATP2A1O14983 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP2A1O14983 HLA-F-220ENST00000434407 884 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 DUSP5P1-201ENST00000441325 1139 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ATP2A1O14983 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.57■■□□□ 1.04
ATP2A1O14983 MIR3917-201ENST00000580971 93 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP2A1O14983 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ATP2A1O14983 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.57■■□□□ 1.04
ATP2A1O14983 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP2A1O14983 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP2A1O14983 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP2A1O14983 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2A1O14983 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATP2A1O14983 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP2A1O14983 RCC2P3-201ENST00000418112 1537 ntBASIC21.56■■□□□ 1.04
ATP2A1O14983 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP2A1O14983 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.56■■□□□ 1.04
ATP2A1O14983 AC079602.3-201ENST00000623931 403 ntBASIC21.56■■□□□ 1.04
ATP2A1O14983 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP2A1O14983 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms