Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 AC093503.3-201ENST00000624917 2352 ntBASIC14.49□□□□□ -0.09
NDUFA4O00483 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NDUFA4O00483 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.48□□□□□ -0.09
NDUFA4O00483 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NDUFA4O00483 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.48□□□□□ -0.09
NDUFA4O00483 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 AP005242.2-201ENST00000580065 1175 ntBASIC14.48□□□□□ -0.09
NDUFA4O00483 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NDUFA4O00483 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.48□□□□□ -0.09
NDUFA4O00483 HEIH-201ENST00000623091 1652 ntBASIC14.48□□□□□ -0.09
NDUFA4O00483 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.48□□□□□ -0.09
NDUFA4O00483 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA4O00483 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.47□□□□□ -0.09
NDUFA4O00483 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 AL512353.2-201ENST00000448759 1962 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 AC004408.2-201ENST00000623613 2777 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA4O00483 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA4O00483 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NDUFA4O00483 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.47□□□□□ -0.09
NDUFA4O00483 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 KRT8P32-201ENST00000512863 1461 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 CRYGFP-201ENST00000418459 633 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 TSPY7P-201ENST00000431358 1114 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.47□□□□□ -0.09
NDUFA4O00483 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA4O00483 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 AL031598.1-201ENST00000561511 1773 ntBASIC14.47□□□□□ -0.09
NDUFA4O00483 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA4O00483 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NDUFA4O00483 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
NDUFA4O00483 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
NDUFA4O00483 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.46□□□□□ -0.09
NDUFA4O00483 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.46□□□□□ -0.09
NDUFA4O00483 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.46□□□□□ -0.09
NDUFA4O00483 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA4O00483 SNORA78-201ENST00000459373 127 ntBASIC14.46□□□□□ -0.09
NDUFA4O00483 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.46□□□□□ -0.09
NDUFA4O00483 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.46□□□□□ -0.09
NDUFA4O00483 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.46□□□□□ -0.09
NDUFA4O00483 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.46□□□□□ -0.09
NDUFA4O00483 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.46□□□□□ -0.09
NDUFA4O00483 AC068587.9-201ENST00000641814 219 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms