Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.68■□□□□ 0.58
TLR4O00206 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.68■□□□□ 0.58
TLR4O00206 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TLR4O00206 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR4O00206 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR4O00206 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TLR4O00206 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.68■□□□□ 0.58
TLR4O00206 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TLR4O00206 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TLR4O00206 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TLR4O00206 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 HCG4P8-203ENST00000443049 980 ntBASIC18.67■□□□□ 0.58
TLR4O00206 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
TLR4O00206 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.67■□□□□ 0.58
TLR4O00206 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.67■□□□□ 0.58
TLR4O00206 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TLR4O00206 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR4O00206 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR4O00206 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 GPAT2P1-201ENST00000444924 1672 ntBASIC18.66■□□□□ 0.58
TLR4O00206 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
TLR4O00206 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TLR4O00206 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TLR4O00206 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR4O00206 AC034232.1-201ENST00000506026 1064 ntBASIC18.66■□□□□ 0.58
TLR4O00206 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR4O00206 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR4O00206 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TLR4O00206 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR4O00206 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.66■□□□□ 0.58
TLR4O00206 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.66■□□□□ 0.58
TLR4O00206 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR4O00206 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.65■□□□□ 0.58
TLR4O00206 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TLR4O00206 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms