Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 AC011298.2-201ENST00000617989 482 ntBASIC19.07■□□□□ 0.64
AP3B1O00203 ITM2C-210ENST00000620962 501 ntBASIC19.07■□□□□ 0.64
AP3B1O00203 AC068587.9-201ENST00000641814 219 ntBASIC19.07■□□□□ 0.64
AP3B1O00203 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.07■□□□□ 0.64
AP3B1O00203 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3B1O00203 KRT8P32-201ENST00000512863 1461 ntBASIC19.07■□□□□ 0.64
AP3B1O00203 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
AP3B1O00203 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3B1O00203 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3B1O00203 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3B1O00203 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
AP3B1O00203 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 FSCN1P1-201ENST00000568912 1481 ntBASIC19.06■□□□□ 0.64
AP3B1O00203 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.06■□□□□ 0.64
AP3B1O00203 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.06■□□□□ 0.64
AP3B1O00203 MIR4651-201ENST00000582622 73 ntBASIC19.06■□□□□ 0.64
AP3B1O00203 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 AC130371.2-201ENST00000619443 611 ntBASIC19.06■□□□□ 0.64
AP3B1O00203 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.06■□□□□ 0.64
AP3B1O00203 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3B1O00203 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP3B1O00203 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3B1O00203 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3B1O00203 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3B1O00203 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3B1O00203 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 KRT18P29-201ENST00000397031 1267 ntBASIC19.05■□□□□ 0.64
AP3B1O00203 FAM207BP-201ENST00000447172 505 ntBASIC19.05■□□□□ 0.64
AP3B1O00203 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3B1O00203 CKBP1-201ENST00000565489 1086 ntBASIC19.05■□□□□ 0.64
AP3B1O00203 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.05■□□□□ 0.64
AP3B1O00203 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
AP3B1O00203 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.05■□□□□ 0.64
AP3B1O00203 AL359736.2-201ENST00000621992 437 ntBASIC19.05■□□□□ 0.64
AP3B1O00203 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.05■□□□□ 0.64
AP3B1O00203 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
AP3B1O00203 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3B1O00203 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3B1O00203 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3B1O00203 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
AP3B1O00203 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.04■□□□□ 0.64
AP3B1O00203 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3B1O00203 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3B1O00203 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.04■□□□□ 0.64
AP3B1O00203 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms