Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 SDHAP1-207ENST00000440850 2000 ntBASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 AL032819.2-201ENST00000624543 2162 ntBASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA3F8WFD2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 TSPY5P-201ENST00000426936 936 ntBASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 AC140113.3-201ENST00000605663 199 ntBASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 AC005332.7-201ENST00000614046 2005 ntBASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA3F8WFD2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 AC011558.1-201ENST00000623459 338 ntBASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA3F8WFD2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA3F8WFD2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA3F8WFD2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA3F8WFD2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms