Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 RBM17P2-201ENST00000616397 1405 ntBASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 AC131281.2-201ENST00000520478 145 ntBASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 MIR4767-201ENST00000582827 78 ntBASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 AL355001.2-201ENST00000620617 1191 ntBASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 CROCCP1-201ENST00000426910 5675 ntBASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.9□□□□□ -0.02
RBFOX3A6NFN3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 FEM1AP3-201ENST00000403722 1741 ntBASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 AC079140.4-201ENST00000507448 529 ntBASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.89□□□□□ -0.03
RBFOX3A6NFN3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms